Epigenetics Hackathon at ecSeq
Posted on August 01, 2018
Right now, three dedicated PhD students, majoring in bioinformatics, are developing a comprehensive software pipeline for the analysis of Bisulfite-Seq data. This software will be used to analyze all incoming bisulfite-treated sequencing data from the EpiDiverse Training Network.
The software will automatically perform the following steps:
- Raw sequence quality control
- Adapter clipping
- Read mapping
- Mapping quality control
- Methylation calling
- DMP calling
- DMR calling
Meet the PhD students
Nilay Can (Philipps University Marburg)
Samar Fatma (Martin Luther University Halle-Wittenberg)
Adam Nunn (ecSeq Bioinformatics GmbH)
Some impressions
